Exactly. She isn't evil, she just has an agenda whose goal is slightly beyond your comprehesion at the beginning of the game. Ultimately, she want people to be "free", whether they care or not and you, the player, is her tool to accomplish that. Thats why she tolerates your excesses, whether they be Dark or Light side. Of course, no matter what you do, you will have failed her in the end (thats what return to Dantooine is about), if you are Dark side, you have become a destroyer of life which is something that must be stopped (like Nihilus) or if you are Light side, you made your choice, not out of a sense of real choice, but because you were afraid. Kreia doesn't need whimps.