Clicking Set All in the Auto-Pause options, then clicking an individual auto-pause option, clears ALL of the other auto-pause checkboxes. Annoying when you want to use Set All and then just clear a few of the options.
I've noticed multiple times that the "Enemy Sighted" option for auto-pause is grayed out. This is during a game, whether in or out of combat. I can check it by clicking Set All, but then the above bug bites me when I want to uncheck other items.
Also, a few times I've opened the Auto-Pause options to find all of my carefully-chosen checkboxes cleared out.