Bump.
I got this exact same problem, tho they dont appear dead.. Just inactive (unable to add/remove, well do anything).
I just got captured by Goto on Nar Shadda, then a cut scence plays where Kreia heals Hanharr bla bla (LS) and so on.
Here the game is suppose to continue into a cut scenece between Atton and the crew but instead the game loads up Atton in the Jedi Masters "apartment" by the docks and from here i can do nothing, all i can do is walk around at the docks AS Atton but cant access areas, doors, items, inventory, click objects & all that. Some really borked bug that is making me unable to progress in the game!!.
Iv tried to reload to a sertain points in the game and progress from there, but everytime after kreia heals hanharr it loads to atton in the jedi masters apartment and then... well u know, nada, nothing..
Is there a fix to this lame annoying bug?
I got 3 save games, a quick save, a save befor entering the "arena" to see Vis whatever, and the a save from the beginning of Nar Shadda (note, i can load my save games but everytime i progress same thing as described above happens).
curse this if i have to start all over